Please enter the organ and gene AGI number:

Root Shoot

Gene Name:
(?)
Module Module MST score (Median) Number of genes in module GO terms (biological process/molecular function) p-value (corrected for multiple hypothesis testing)
Shoot module 1 8 70 GO:0010467 - gene expression, GO:0003735 - structural constituent of ribosome, GO:0022613 - ribonucleoprotein complex biogenesis, GO:0003723 - RNA binding 0.001
Shoot module 2 19 54 GO:0009743 - response to carbohydrate stimulus, GO:0043412 - biopolymer modification < 0.01
Shoot module 3 8 14 GO:0003735 - structural constituent of ribosome 0.001
Shoot module 4 9 8 --- ---
Shoot module 5 17 8 GO:0009733 - response to auxin stimulus 0.001
Shoot module 6 9 17 GO:0034728 - nucleosome organization, GO:0006139 - nucleobase, nucleoside, nucleotide and nucleic acid metabolic process < 0.002
Shoot module 7 17 6 --- ---
Shoot module 8 20 7 GO:0009737 - response to abscisic acid stimulus, GO:0004722 - protein serine/threonine phosphatase activity, GO:0009414 - response to water deprivation < 0.004
Shoot module 9 11 12 --- ---
Shoot module 10 15 4 --- ---
Module Module MST score (Median) Number of genes in module GO terms (biological process/molecular function) p-value (corrected for multiple hypothesis testing)
Root module 1 8 66 GO:0034645 - cellular macromolecule biosynthetic process, GO:0003735 - structural constituent of ribosome, GO:0006412 - translation, GO:0022613 - ribonucleoprotein complex biogenesis, GO:0051726 - regulation of cell cycle, GO:0006259 - DNA metabolic process <0.01
Root module 2 19 57 GO:0010200 - response to chitin, GO:0006952 - defense response, GO:0050896 - response to stimulus, GO:0006950 - response to stress < 0.01
Root module 3 13 14 --- ---
Root module 4 20 9 GO:0009737 - response to abscisic acid stimulus, GO:0009414 -response to water deprivation, GO:0004722 - protein serine/threonine phosphatase activity, GO:0048523 - negative regulation of cellular process, GO:0009266 - response to temperature stimulus < 0.05
Root module 5 10 5 --- ---
Root module 6 9 5 --- ---
Root module 7 10 8 GO:0034728 - nucleosome organization 0.001
Root module 8 21 5 --- ---
Root module 9 15 4 --- ---
Root module 10 12 8 GO:0033036 - macromolecule localization 0.023
Root module 11 19 4 --- ---
Root module 12 13 4 --- ---
Root module 13 8 5 --- ---
Root module 14 9 4 --- ---
Root module 15 7 4 GO:0006139 - nucleobase, nucleoside, nucleotide and nucleic acid metabolic process, GO:0010467 - gene expression 0.004